Example and sample data

Example:

Sample data
wget https://github.com/nselem/EvoMining/tree/master/example

1. After starting EvoMining on the promt start EvoMining web pipeline
   

2. Start expansions heat map
   

3. Visualize expansions heatmap. Organisms are distributed on the rows of the table. Each colum represent an enzyme family. When an organism has a copy number above the average plus one standar deviation on one particular enzyme family, the correspondent square is filled in red, representing an expansion of tha enzyme family on that particular organism. Once the heatmap is finished, continue to the NP recruitment search.
   

4.NP recruitments

5.Selected trees finished

6.Visualize tree
6.1 Non expanded tree

6.2 Expanded tree

ALL_curado.fasta_MiBIG_DB.faa_los10