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Support case-insensitive morphology paths and extensions#83

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ilkilic merged 3 commits into
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linux-morph-path-res
Apr 23, 2026
Merged

Support case-insensitive morphology paths and extensions#83
ilkilic merged 3 commits into
mainfrom
linux-morph-path-res

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@ilkilic ilkilic commented Apr 23, 2026

Fix case-sensitive file lookup on Linux by resolving morphology paths case-insensitively and normalizing extensions to lowercase.

Adds regression tests to ensure consistent behavior across platforms.

@ilkilic ilkilic changed the title test: add case-insensitive morphology path test Add failing test for case-insensitive morphology path handling Apr 23, 2026
@ilkilic ilkilic changed the title Add failing test for case-insensitive morphology path handling Support case-insensitive morphology paths and extensions Apr 23, 2026
@ilkilic ilkilic self-assigned this Apr 23, 2026
@ilkilic ilkilic requested a review from darshanmandge April 23, 2026 14:39
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codecov Bot commented Apr 23, 2026

Codecov Report

❌ Patch coverage is 98.00000% with 1 line in your changes missing coverage. Please review.

Files with missing lines Patch % Lines
bluecellulab/cell/morphio_wrapper.py 95.83% 1 Missing ⚠️
Files with missing lines Coverage Δ
tests/test_cell/test_morphology_wrapper.py 96.93% <100.00%> (+0.33%) ⬆️
bluecellulab/cell/morphio_wrapper.py 97.90% <95.83%> (-0.30%) ⬇️
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@darshanmandge darshanmandge left a comment

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Thanks for fixing it!

@ilkilic ilkilic merged commit 1a7dbd3 into main Apr 23, 2026
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@ilkilic ilkilic deleted the linux-morph-path-res branch April 23, 2026 14:59
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2 participants