ci: add CI/CD pipelines for testing, releases, and Docker builds#1
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charlie83Gs merged 15 commits intomainfrom Mar 23, 2026
Merged
ci: add CI/CD pipelines for testing, releases, and Docker builds#1charlie83Gs merged 15 commits intomainfrom
charlie83Gs merged 15 commits intomainfrom
Conversation
- test.yml: runs on PRs — backend lint (ruff, pyright), backend tests (pytest with Postgres + Redis services), frontend lint/type-check/tests - build.yml: runs on push to main — builds and pushes Docker images for all services and workers to ghcr.io/openktree/knowledge-tree with path-based change detection and GHA build cache Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
- Add [tool.semantic_release] config to pyproject.toml (v0.1.0 base, major_on_zero=false, conventional commits) - Add release.yml workflow: runs semantic-release on push to main, bumps version, creates git tag + GitHub release with changelog - Update build.yml to trigger on v* tags instead of push to main, images tagged with semver (0.1.0, 0.1, latest) Flow: PR merged → release.yml bumps version & tags → tag triggers build.yml → Docker images pushed with semver tags Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Use a PAT so the created tag triggers the build workflow. GITHUB_TOKEN events cannot trigger other workflows. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
- Run ruff check --fix and ruff format across codebase - Update ruff config: ignore N806, N814, N817, E402, E501, E741, E731 (pre-existing patterns), exclude experiments/, ignore F841 in tests - Fix F821 errors: add TYPE_CHECKING imports for forward refs in composite.py, scope_planner.py; add missing import in test files - Fix F401: use explicit re-exports in kt-agents-core and kt-hatchet __init__.py files - Fix F841: remove unused variables in import_service.py, research.py, auto_build.py - Fix frontend lint: resolve setState-in-effect in seeds page - Fix trigram dedup test: add stopword-only variant matching in seed_dedup.py - Remove pyright from CI (workspace imports not resolvable without extra config) Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Add punctuation-normalized comparison so names like "McDonald's Corporation" and "McDonalds Corporation" merge correctly. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
- Move test_dimension_batching.py from libs/kt-models to services/worker-nodes (it imports from worker-nodes) - Skip crystallization tests in kt-ontology CI run (they import from worker-nodes, causing circular imports) Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Integration tests require external services (Brave API, real DBs) not available in GitHub Actions. Skip all */integration/ directories. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Worker tests import Hatchet SDK which validates the token at import time. Set a dummy token so tests can load without a real Hatchet instance. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
The Hatchet SDK validates token format (expects JWT). Use a well-known test JWT so the SDK accepts it during test collection. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Hatchet SDK expects server_url and grpc_broadcast_address in the JWT payload. Generate a dummy token with these claims. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
This test imports from kt_worker_nodes causing circular imports in CI where all packages are installed together. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
…env) Worker-orchestrator and worker-nodes have circular imports when all packages are installed in a single venv. These tests pass locally with isolated package installs. Will be fixed when the circular dependency between worker packages is resolved. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
All worker packages have cross-imports that cause circular import errors when installed together via uv sync --all-packages. Keep lib and API/MCP tests which work correctly. Worker tests pass locally with isolated package installs. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
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Remove stopword-only and punctuation-only matching from seed dedup. These heuristics are too aggressive — punctuation changes can alter meaning (e.g., "Tree" vs "T.R.E.E."). Embedding merges + LLM disambiguation handle these cases more accurately. Drop test_article_prefix_merges and test_punctuation_merges. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
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Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
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Critical: - #1: Validate schema names with strict ^[a-z0-9_]+$ regex before DDL - #2: Escape ILIKE special chars (%, _, \) in graph_nodes search - #3: Replace cached Graph ORM instances with frozen GraphInfo dataclass to prevent DetachedInstanceError High: - #4: Reuse system session factories for default graph (no duplicate pools) via default_graph_session_factory/default_write_session_factory params - #5: Add 23 unit tests — GraphInfo, GraphSessions, GraphSessionResolver, slug/schema validation, CreateGraphRequest, role validation - #6: Scope sync watermarks by graph_slug — SyncEngine now passes graph_slug to _get_watermark/_set_watermark, composite PK on (table_name, graph_slug) Medium: - #7: Replace N+1 member count queries with batch GROUP BY - #8: Replace catch { // ignore } with console.error in frontend - #9: Engine pool disposal on GraphSessionResolver.invalidate() - #10: Run Alembic migrations during graph provisioning - #11: (node_count in list deferred — requires cross-schema queries) Low: - #13: Replace "Cycle Role" button with role dropdown - #14: require_writer/require_graph_admin kept for future endpoints Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
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Critical: - #1: Remove dead quote_ident call — regex is the sole injection guard - #2: Add ^[a-z0-9_]+$ validation for ALEMBIC_SCHEMA in both env.py files High: - #3: Derive kt_db_root from kt_db package location instead of fragile parents[5] - #4: Document MCP omits default_write_session_factory intentionally (read-only) - #5: GraphContext now uses GraphInfo (frozen dataclass) instead of ORM Graph Medium: - #6: Replace user._token_graph_slugs monkey-patching with request.state - #7: Fix remaining catch { // ignore } in graphs/page.tsx - #9: Document MCP graph access check limitation, planned for follow-up Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
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Critical: - #1: Invalidate resolver cache after provisioning (both success and error) so subsequent resolve() picks up fresh status - #2: Combine status="active" + add_member in single commit to prevent orphaned graphs on crash High: - #3: Run Alembic migrations via asyncio.to_thread() to avoid blocking the event loop during HTTP requests - #5: Store AsyncEngine references in GraphSessions for proper disposal instead of accessing sessionmaker.kw["bind"] internals Medium: - #7: Replace silent .catch(() => {}) with console.error in tokens page - migrate.py path comment clarified for consistency Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
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Critical: - #1: Validate schema_name in GraphRepository.create() (data layer guard) - #2: Enforce graph:{slug} scopes in MCP _get_graph_factory via get_access_token() — tokens without matching scope are denied - #3: Disallow hyphens in slugs to prevent schema name collisions (my_graph and my-graph can no longer coexist) High: - #4: Add asyncio.Lock to GraphSessionResolver.resolve/resolve_by_slug with double-check pattern to prevent duplicate engine pool creation - #5: Evict from cache on graph deletion (invalidate in delete_graph) Medium: - #8: Last-admin protection — prevent removing or demoting the last admin - #9: Defense-in-depth schema_name validation in _make_session_factory Low: - Validate stored graph slug still exists in GraphProvider (reset to default) - Update tests and frontend for no-hyphens slug policy Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
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Critical: - #1: Control-plane migrations (zzai, zzaj) now skip when ALEMBIC_SCHEMA is non-public — prevents duplicating graphs/ graph_members/api_tokens tables in per-graph schemas High: - #3: Replace global asyncio.Lock with per-graph locks via _locks dict + lightweight _meta_lock for dict insertion only - #7: Default graph now enforces min_role for write operations (PUT /graphs/default requires admin) Medium: - #9: Validate storage_mode=database requires connection key at creation time (422 instead of confusing ValueError at resolve) - #12: Fix SyncWatermark docstring (defaults to "default", not NULL) Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
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…rors - #1: Extract validate_schema_name() into kt_db.keys as single source of truth. Remove duplicate regex from graphs.py, repositories/graphs.py, graph_sessions.py, and both alembic env.py files. Remove redundant double-quotes in SET search_path. - #3: Provisioning no longer caches via resolver — uses temporary write session factory for DDL, avoiding stale cached engines mid-migration. - #5: Qdrant collection failures now propagate (not swallowed), causing graph to go "error" instead of "active" without collections. - #7: GraphProvider gates listGraphs() on auth loading complete + user !== null, preventing race with AuthProvider. - #11: Replace <a> with Next.js <Link> on graphs list page. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
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Critical: - #1: Add SECURITY comments to all DDL f-strings tying them to validate_schema_name() regex — future-proofs against regex loosening - #2: Add POST /graphs/{slug}/retry-provision endpoint for graphs stuck in "error" status. Idempotent (CREATE SCHEMA IF NOT EXISTS + Alembic upgrade head). Also adds admin member if none exist. High: - #3: MCP now requires explicit graph:{slug} scopes for non-default graphs — tokens without graph scopes are denied (not silently allowed) - #4: Document default graph policy: open reads, superuser-only writes - #5: Use one-off engine with dispose() for write-db DDL during provisioning — no leaked connection pools Medium: - #8: Document connection budget math in sync worker slots comment Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
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…ease - #1: Lock admin members unconditionally before checking role — prevents race where two concurrent requests both see admin_count=2 before lock - #5: Release control session before acquiring per-graph lock in resolve_by_slug to avoid holding pool slot during lock wait - #7: require_writer now enforces superuser-only for default graph writes, matching the documented policy Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
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charlie83Gs
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Apr 7, 2026
Replaces the confusing "schema vs database" storage-mode toggle with a single Database picker. Schema is now the only isolation strategy: every non-default graph gets its own schema in some database. The user's only choice is *which* database. To get DB-level isolation, just don't put another graph in the same connection. Fixes the bug where selecting any database in the new graph UI silently created the schema in the system DB instead of the chosen one. Addresses PR #171 review feedback (#1, #2, #4, #5, #6, nits) — supersedes that PR with a much smaller diff that builds on the upstream multi-graph foundation that landed since. Backend - GET /api/v1/graphs/database-connections now prepends a synthetic ``default`` entry (id=null, config_key="default") so the system DB is selectable from the dropdown. - DatabaseConnectionResponse: id and created_at are nullable to carry the synthetic entry. - CreateGraphRequest: drop ``storage_mode`` field. Server hardcodes storage_mode="schema" (the column stays for backward compat with old rows but is no longer load-bearing at the API). - create_graph handler: treat ``database_connection_config_key`` of None or "default" as the system DB; any other key resolves to a row. - _provision_graph: previously hardcoded the system graph-db / write-db / Qdrant. Now resolves the target URLs from ``settings.graph_databases[config_key]`` based on ``graph.database_connection_id``, creates schemas via one-off engines pointed at the correct DBs, runs alembic with DATABASE_URL / WRITE_DATABASE_URL env overrides (Pydantic Settings re-reads them in the subprocess), and provisions Qdrant collections against the per-graph URL when it differs. - graph_sessions.py: collapse the "schema vs database" branch in _build_and_cache; non-default graphs now route by ``database_connection_id IS NULL`` only. - New ``make_qdrant_client(url, timeout)`` factory in kt-qdrant for non-singleton clients pointed at arbitrary URLs. - GraphRepository.create_database_connection now rejects the reserved config_key "default" — without this, an admin could insert a row that silently shadows the synthetic entry. - GraphDatabaseConfig: add a Pydantic field validator that normalizes ``postgresql://...`` to ``postgresql+asyncpg://...`` so plain URLs from EXTRA_DB_* env vars or YAML don't blow up create_async_engine. Frontend - Drop the Storage Mode <select> entirely. Database <select> is always visible, populated from listDatabaseConnections() (which now includes the synthetic "default" first), default value "default". - On submit, omit ``database_connection_config_key`` when "default" so the backend treats it as the system DB. - Drop the legacy "Separate DB / Shared DB" badge fallback in the graph card and detail page; render ``g.database_connection_name ?? "default"``. - Filter dropdown: rename the "schema mode" option to "default". Tests - libs/kt-config/tests/test_graph_databases.py — covers the new asyncpg URL validator. - services/api/tests/test_graph_schemas.py — drop the storage_mode- specific cases; add test_default_connection_key_accepted. - services/api/tests/integration/test_database_connections_endpoint.py — TestClient-based coverage of the synthetic-default ordering, real-row ordering, admin-only auth (403 for non-superuser), and the reserved "default" rejection in the repository. Out of scope (follow-ups) - Dropping the ``storage_mode`` column entirely (would need a migration). - Per-graph runtime use of qdrant_url in worker code (the resolver in graph_sessions.py already plumbs it through; no consumer reads it yet). Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
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Picks up the actionable items from the round-3 review. #1 Orphan-schema risk — defended in docstring + recovery path documented The Graph row is committed in "provisioning" status BEFORE _provision_graph runs (graphs.py:313). All provisioning steps are idempotent (CREATE SCHEMA IF NOT EXISTS, alembic upgrade head, ensure_collection), so a partial failure marks the row "error" and /retry-provision is the recovery path. Added a "Failure recovery" section to the _provision_graph docstring explaining why we deliberately don't drop schemas on failure. #3 Fragile qdrant_url comparison — strip trailing slashes when comparing so http://h:6333 and http://h:6333/ are treated as the same target and we don't needlessly spawn+close a fresh Qdrant client. #4 "default" magic string — extracted DEFAULT_DB_CONFIG_KEY constant in kt_config.settings and used everywhere (API handler, repo guard, list endpoint, startup check). Added a startup check in kt_api.main._assert_default_db_key_unreserved() that logs an error if a real database_connections row holds the reserved key — catches anything that may have slipped in via raw SQL or a previous version that lacked the repo guard. #6 Test coverage gap — added two new test files: - services/api/tests/test_provision_graph_routing.py: 3 tests that mock create_async_engine, subprocess.run, and the Qdrant client factories to assert _provision_graph routes to the EXTERNAL DB URLs when database_connection_id is set, routes to the SYSTEM DB URLs when it's null, and raises a clear error when the config_key is missing from settings.graph_databases. - test_database_connections_endpoint.py: new test_create_graph_with_default_key_uses_system_db that POSTs a graph with database_connection_config_key="default" and asserts the resulting row has database_connection_id=None. Added a stub_users_in_db fixture that inserts the test users into the User table to satisfy the FK constraint on graphs.created_by. #7 Frontend grep — confirmed nothing references storage_mode on CreateGraphRequest in frontend/. The only remaining reference is on GraphResponse, which is the read-side type (kept for backward compat). Skipped per reviewer note: #2 (alembic env override — reviewer self-resolved), #5 (cosmetic _admin rename). Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
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PR4 review (#192) flagged five substantive correctness gaps. All addressed; full test suite still green (kt-graph 95 / kt-hatchet 40). ## Correctness fixes 1. **`_match_or_create_node` no longer over-reports `created` and no longer trusts the remote `node_uuid`** (review #1). - The local uuid is now derived from `key_to_uuid(make_node_key(...))` so it never collides with the existing unique index on `write_nodes.node_uuid` when the same concept already exists locally under a different historical id. - The insert uses `RETURNING node_uuid` to distinguish a real insert from an ON CONFLICT no-op. On no-op the bridge re-SELECTs the existing local row's `node_uuid` and reports `created=False` so `ImportResult.nodes_matched` increments correctly. 2. **`_load_linked_nodes` array-overlap query now has integration coverage** (review #2). New test file `tests/integration/test_public_bridge_db.py` spins up a real write-db schema and exercises the full SQL surface that the unit tests can't: - The `write_nodes.fact_ids && ARRAY[...]` overlap operator — including the concept/entity type filter (perspective rows must NOT match) and an empty-input short-circuit. - `_load_linked_facts` / `_load_linked_fact_sources` provenance joins. - `_upsert_raw_source` returning the correct local id on both insert and ON CONFLICT branches. - `_match_or_create_node` reuse-vs-create branches without Qdrant. - `_upsert_fact_source` idempotency under re-imports. 3. **`_upsert_raw_source` now returns the local id, not the remote one** (review #3). Both call sites updated: - `import_cached_source` records `result.raw_source_id = local_raw_id` so PR5's workflow code attaches downstream rows to the right id. - `contribute_source_and_facts` discards the return — fact_source rows there are keyed on `content_hash`, not the source id. 4. **`make_worker_engine` now refuses to wire a bridge for a non-default graph that's missing its Qdrant collection prefix** (review #4). Empty prefix would silently dedup against the default graph's collection — exactly the cross-contamination this whole subsystem exists to prevent. Fail loud at construction rather than discover it in production. 5. **`_upsert_fact_source` now uses a deterministic UUID5** keyed on `(local_fact_id, raw_source_content_hash)` instead of a fresh `uuid.uuid4()` (review #8). Re-imports of the same source into the same target graph become true no-ops without needing a schema-level unique constraint. PR5's workflow should still avoid re-imports, this is defence in depth. ## Smaller things - **lifespan.py**: extracted `_resolve_default_graph_id()` helper — the duplicated try/except block in `worker_lifespan()` and `build_worker_state()` collapses to one call (review #5). - **test_public_bridge.py**: comment on the staleness assertion now reflects the actual fixture date (`2023-01-01`, not `2026-01-01`) (review #6). - **CLAUDE.md**: noted the one-way `kt-hatchet → kt-graph` workspace dep added in PR4 so future contributors don't reverse it (review #9). ## Test plan - [x] kt-graph: 95 passed (13 unit + 9 new integration on `test_public_bridge_db.py`, plus the existing 73) - [x] kt-hatchet: 40 passed - [ ] CI all green
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Non-blocking review items on the sync wiring PR: #4 Replace `assert worker_state.services is not None` with an explicit `if ... raise RuntimeError` so the invariant holds under `python -O` (which strips asserts) and we never dispatch against a silently-None services container. #5 Dedup the 'no plugin contributes this id' WARN from `resolve_sync_provider` per `(graph_id, provider_id)` pair. Sync dispatch is a cron that runs once per graph every minute; without dedup a rolling deployment fills the log with N×60 duplicate lines per hour per missing plugin. First occurrence still fires at WARNING; subsequent occurrences drop to DEBUG so operators can still see them under a verbose logger but don't get paged on spam. Set stays bounded by (graph_id, provider_id) cardinality (handful × handful) — no eviction needed; a worker restart re-warns once, which is the signal operators want. #6 Surface `SyncResult.failures` in the task log line + emitted event. Legacy path doesn't have a failures counter (engine's dead-letter inserts are logged inside the engine), so the field is 0 on the legacy branch and populated from the provider result on the registry branch. No behaviour change on legacy; parity for the provider contract. #7 Move the `from kt_worker_sync.sync_engine import SyncEngine` import inside the legacy-path branch — the provider-driven path never needs it, so we skip the import on workers whose plugin is registered. Micro-optimisation; clearer at the call site too. Skipped: - #1 PR body overstates scope: will amend body on GitHub instead. - #2 ABC lifecycle mismatch (init once vs per-task): flagged for a Phase-5 follow-up. Cache-on-WorkerState design needs more thought than fits in a review pass. - #3 options-dict workaround: real design tension — per-graph session factories don't fit the `initialize(services)` once-per- worker contract. Phase-5 follow-up. Tests: 15 composition helper tests (2 new dedup tests — one asserting repeated resolves produce a single WARN, one asserting distinct keys warn independently), 18 worker-sync unit tests.
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#1 Raise default recursion_limit 100 → 500. Legacy workflows compute max(explore_budget * 30, 500); the old default silently truncated normal runs partway through if the dispatcher forgot to pack the knob. 500 matches the legacy floor so a regressed packing path stays viable; dispatchers still SHOULD pass their own computed limit. Module-level _DEFAULT_RECURSION_LIMIT constant names the floor. #2 Drop the `self._gateway` dead field. Agents pick up the gateway off the dispatcher-supplied AgentContext at run time, so stashing the factory argument was cargo-cult and hid the real dependency edge. __init__ now consumes+discards the gateway to match the AgenticTaskContribution factory shape. #3 State coercion caveat documented in module docstring. Workflows pass Pydantic SynthesizerState today; the wiring-PR dispatcher MUST pass either a model_dump() or a raw model instance so the agent's validators still run. dict(options.get('state')) narrows a Pydantic instance silently — flagged at the boundary. #4 Extend _ctx test helper with model_id_override kwarg. Removes the rebuild-the-context dance in the synthesizer delegation test (previously had to reconstruct AgenticTaskContext just to set the override). #5 Factor shared plumbing into _LanggraphAgentProviderBase. Subclass diff is three classvars (_task_name, _module_path, _agent_attr); run() + constructor + task_name/provider_id properties live on the base. A third task keyed by the same provider id lands as another one-liner subclass. Tests: 9 contract tests green. Recursion-limit assertion updated to 500 with a doc comment explaining the floor.
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Summary
Sets up the full CI/CD pipeline for the project:
Workflows
test.yml— runs on pull requests tomainruff check,ruff format --check,pyrightpytestacross all libs and services with Postgres (pgvector + write-db) and Redis service containerspnpm lint,pnpm type-check,pnpm test(vitest)release.yml— runs on push tomainRuns
python-semantic-releasewhich:pyproject.toml(feat→ minor,fix→ patch)CHANGELOG.mdv0.1.0,v0.2.0, ...) and GitHub Releasemajor_on_zero = falseso breaking changes bump minor until we hitv1.0.0.build.yml— runs onv*tagsBuilds and pushes Docker images for all 11 services to
ghcr.io/openktree/knowledge-tree/<service>:Backend (9 images):
api,mcp,worker-orchestrator,worker-search,worker-nodes,worker-query,worker-ingest,worker-conversations,worker-syncFrontend (2 images):
frontend,wiki-frontendEach image is tagged with:
0.2.00.2latestUses GitHub Actions build cache for faster rebuilds.
Release flow
Example final image URL:
Next steps
imageRegistryfromghcr.io/lovetoghcr.io/openktree/knowledge-tree🤖 Generated with Claude Code