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    4 repositories

    • Comparison_interaction_methodologies

      Public
      Here we have code and data used to compare 3 different methodologies used to infer interaction frequencies between plants and pollinators: observations, gut contents, pollen balls
      HTML
      •
      Creative Commons Zero v1.0 Universal
      •0•1•0•0•Updated Jan 8, 2026Jan 8, 2026

    • DADA2

      Public
      A general dada2 pipeline for amplicon processing
      R
      •
      Creative Commons Zero v1.0 Universal
      •0•1•0•0•Updated Feb 4, 2025Feb 4, 2025

    • qiime2

      Public
      A general qiime2 pipeline for amplicon processing
      Shell
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Nov 19, 2024Nov 19, 2024

    • DIPC_HPC_settings

      Public
      Guidelines, recommendations, and tips for working on the DIPC High Performance Cluster. All commands have been tested on Hyperion and are expected to be compatible with Atlas EDR and FDR systems as well
      bashits16s-rrna
      0•1•0•0•Updated Sep 4, 2024Sep 4, 2024