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Minor update to include static binaries

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@pimentel pimentel released this 13 May 00:55
· 1135 commits to master since this release

This is version 0.42.1 of Kallisto. We recommend that users upgrade to this version.

Updates include

  • index
    • now accepts multiple FASTA files and creates an index of all the targets
    • transcripts that end with polyA, runs of length 10 or greater have the polyA tail clipped
  • quant
    • now accepts multiple FASTQ paired end files, or single-end files
    • --single flag to specify single-end reads
    • simplified jumping rules
    • uses soft-intersect, if one read has no mapping k-mers the other end is used for pseudoalignment