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2.1

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@github-actions github-actions released this 09 Feb 15:11
· 35 commits to main since this release
2.1
26b27ea

New

  • migrate assign-mi from harpy to djinn sam
    • assigns MI and BX tags for unique molecules based on an alignment distance threshold
  • migrate concat from harpy to djinn sam
    • concatenate SAM/BAM files while preserving within-sample molecule uniqueness
  • djinn sam commands have a -S/--sam option to output SAM format instead of BAM
  • specify where interleaved files wont work

Fixes

  • fixed sam standardize incorrectly outputting only the first occurrence of a new barcode when -s style was invoked

Full Changelog: 2.0...2.1

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