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* v2.0.0-dev: Cython packaging (#35)
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@@ Coverage Diff @@
## v2.0.0-dev #34 +/- ##
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Coverage ? 37.95%
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Files ? 22
Lines ? 1523
Branches ? 0
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Hits ? 578
Misses ? 945
Partials ? 0 Continue to review full report at Codecov.
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* v2.0.0-dev: (26 commits) Fix issue with time.clock (#34) Cython packaging (#35) Pull CI related changes from SLICE-fix Remove python2.7 support and correct corresponding pylint errors Add new python versions and support for pandas>1.0 Updated python versions to test against. Merge fixes from V1.2.0 dev (#31) Fix pylint errors Remove deprecated pandas .ix operator Test against new versions of python Fix pylint errors specific to python3 Removed python3.4 from travis Bump version number Remove support for python3.4 Fixed pylint errors Added changelog Fix problem processing uncompressed fastqs Remove outdated reference to MACS New minor version Check that pandas hasn't mangled numeric sample names ...
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* v2.0.0-dev: Add cpp files to gitignore Calculate coverage in bp rather than reads for subsequent thresholding (#32) Add option to use NPMI normalisation (#24) Add fixed threshold option to process_nps command (#9) Fix issue with time.clock (#34) Cython packaging (#35) Pull CI related changes from SLICE-fix
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