[MRG] Update readme, version, docstrings and add release notes

README.md

@@ -56,11 +56,17 @@ Encoding of JPEG images is not currently supported
 from pydicom import dcmread
 from pydicom.data import get_testdata_file
 
+import pylibjpeg
+
 ds = dcmread(get_testdata_file('JPEG-LL.dcm'))
 arr = ds.pixel_array
 ```
 
-#### Standalone
+#### Standalone JPEG decoding
+
+You can also decode JPEG images to a [numpy ndarray][1]:
+
+[1]: https://docs.scipy.org/doc/numpy/reference/generated/numpy.ndarray.html
 
 ```python
 from libjpeg import decode

docs/release_notes/v1.0.0.rst

@@ -0,0 +1,6 @@
+.. _v1.0.0:
+
+1.0.0
+=====
+
+* Initial release

libjpeg/__init__.py

@@ -1,17 +1,5 @@
 """Set package shortcuts."""
 
-import sys
-
 from ._config import DICOM_ENCODERS, DICOM_DECODERS
 from ._version import __version__
 from .utils import decode, decode_pixel_data, get_parameters
-
-
-# Add the testing data to libjpeg (if available)
-try:
-    import data as _data
-    globals()['data'] = _data
-    # Add to cache - needed for pytest
-    sys.modules['libjpeg.data'] = _data
-except ImportError:
-    pass

libjpeg/_version.py

@@ -3,7 +3,7 @@
 import re
 
 
-__version__ = '1.0.0.dev1'
+__version__ = '1.0.0'
 
 
 VERSION_PATTERN = r"""

libjpeg/tests/__init__.py

@@ -1,9 +1,20 @@
 
+import sys
+
 try:
     from . import pydicom_handler as handler
 except ImportError:
     pass
 
+# Add the testing data to libjpeg (if available)
+try:
+    import data as _data
+    globals()['data'] = _data
+    # Add to cache - needed for pytest
+    sys.modules['libjpeg.data'] = _data
+except ImportError:
+    pass
+
 
 def add_handler():
     """Add the pixel data handler to *pydicom*.

libjpeg/utils.py

@@ -67,7 +67,7 @@ def decode(arr, colour_transform=0, reshape=True):
         | ``2`` : JPEG-LS pseudo RCT or RCT
         | ``3`` : Freeform
     reshape : bool, optional
-        Reshape and review the output array so it matches the image data
+        Reshape and re-view the output array so it matches the image data
         (default), otherwise return a 1D array of ``np.uint8``.
 
     Returns
@@ -116,6 +116,8 @@ def decode(arr, colour_transform=0, reshape=True):
 def decode_pixel_data(arr, photometric_interp):
     """Return the decoded JPEG data from `arr` as a :class:`numpy.ndarray`.
 
+    Intended for use with *pydicom* ``Dataset`` objects.
+
     Parameters
     ----------
     arr : numpy.ndarray or bytes

setup.py

@@ -163,28 +163,24 @@ def get_source_files():
     license = "GPL V3.0",
     keywords = (
         "dicom pydicom python medicalimaging radiotherapy oncology imaging "
-        "jpg jpeg jpg-ls jpeg-ls libjpeg pylibjpeg"
+        "radiology nuclearmedicine jpg jpeg jpg-ls jpeg-ls libjpeg pylibjpeg"
     ),
-    project_urls = {
-        # Might give it it's own docs eventually
-        'Documentation' : 'https://pydicom.github.io/pydicom/'
-    },
     classifiers = [
         "License :: OSI Approved :: GNU General Public License v3 (GPLv3)",
         "Intended Audience :: Developers",
         "Intended Audience :: Healthcare Industry",
         "Intended Audience :: Science/Research",
-        "Development Status :: 3 - Alpha",
+        #"Development Status :: 3 - Alpha",
         #"Development Status :: 4 - Beta",
-        #"Development Status :: 5 - Production/Stable",
+        "Development Status :: 5 - Production/Stable",
         "Natural Language :: English",
         "Programming Language :: C++",
         "Programming Language :: Python :: 3.6",
         "Programming Language :: Python :: 3.7",
         "Programming Language :: Python :: 3.8",
-        "Operating System :: MacOS :: MacOS X",  # Tested OK
-        "Operating System :: POSIX :: Linux",  # Tested OK
-        "Operating System :: Microsoft :: Windows",  # Tested OK
+        "Operating System :: MacOS :: MacOS X",
+        "Operating System :: POSIX :: Linux",
+        "Operating System :: Microsoft :: Windows",
         "Topic :: Scientific/Engineering :: Medical Science Apps.",
         "Topic :: Software Development :: Libraries",
     ],