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Fix assignment of num_tasks #272

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Merged
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Apr 30, 2018
Merged

Fix assignment of num_tasks #272

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20 changes: 10 additions & 10 deletions cscs-checks/apps/namd/namd_check.py
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Original file line number Diff line number Diff line change
Expand Up @@ -19,6 +19,16 @@ def __init__(self, variant, **kwargs):
'NAMD')
self.executable = 'namd2'

self.use_multithreading = True
self.num_tasks_per_core = 2

if self.current_system.name == 'dom':
self.num_tasks = 6
self.num_tasks_per_node = 1
else:
self.num_tasks = 16
self.num_tasks_per_node = 1

energy = sn.avg(sn.extractall(r'ENERGY:(\s+\S+){10}\s+(?P<energy>\S+)',
self.stdout, 'energy', float))
energy_reference = -2451359.5
Expand Down Expand Up @@ -52,9 +62,7 @@ def __init__(self, version, **kwargs):
super().__init__('gpu_%s' % version, **kwargs)
self.valid_systems = ['daint:gpu', 'dom:gpu']
self.executable_opts = '+idlepoll +ppn 23 stmv.namd'.split()
self.use_multithreading = True
self.num_cpus_per_task = 24
self.num_tasks_per_core = 2
self.num_gpus_per_node = 1


Expand Down Expand Up @@ -91,15 +99,7 @@ def __init__(self, version, **kwargs):
super().__init__('cpu_%s' % version, **kwargs)
self.valid_systems = ['daint:mc', 'dom:mc']
self.executable_opts = '+idlepoll +ppn 71 stmv.namd'.split()
self.use_multithreading = True
self.num_cpus_per_task = 72
self.num_tasks_per_core = 2
if self.current_system.name == 'dom':
self.num_tasks = 6
self.num_tasks_per_node = 1
else:
self.num_tasks = 16
self.num_tasks_per_node = 1


class NamdCPUProdCheck(NamdCPUCheck):
Expand Down