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[test] Adapt NetCDF test to Kesch #482

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Merged
merged 5 commits into from
Oct 9, 2018
Merged

[test] Adapt NetCDF test to Kesch #482

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2f3616d
WIP: correct programming environment required
ajocksch Sep 27, 2018
8ce908f
netcdf final; inconsistency in PrgEnv-...
ajocksch Sep 27, 2018
27bee9e
Fine-tune NetCDF test for Daint/Dom/Kesch
Oct 9, 2018
fb93a1f
Merge branch 'master' into checks/netcdf
Oct 9, 2018
df4ec9c
Merge branch 'master' into checks/netcdf
vkarak Oct 9, 2018
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38 changes: 33 additions & 5 deletions cscs-checks/libraries/io/netcdf_compile_run.py
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Original file line number Diff line number Diff line change
Expand Up @@ -19,15 +19,23 @@ def __init__(self, lang, linkage):
self.linkage = linkage
self.descr = lang_names[lang] + ' NetCDF ' + linkage.capitalize()
self.valid_systems = ['daint:gpu', 'daint:mc',
'dom:gpu', 'dom:mc']
self.valid_prog_environs = ['PrgEnv-cray', 'PrgEnv-gnu',
'PrgEnv-intel', 'PrgEnv-pgi']
'dom:gpu', 'dom:mc', 'kesch:cn']
if self.current_system.name in ['daint', 'dom']:
self.valid_prog_environs = ['PrgEnv-cray', 'PrgEnv-gnu',
'PrgEnv-intel', 'PrgEnv-pgi']
elif self.current_system.name == 'kesch':
self.valid_prog_environs = ['PrgEnv-pgi-nompi']
if lang != 'f90':
self.valid_prog_environs += ['PrgEnv-cray-nompi']

self.sourcesdir = os.path.join(self.current_system.resourcesdir,
'netcdf')
self.build_system = 'SingleSource'
self.build_system.ldflags = ['-%s' % linkage]
self.sourcepath = 'netcdf_read_write.' + lang
self.modules = ['cray-netcdf']
if self.current_system.name in ['daint', 'dom']:
self.modules = ['cray-netcdf']

self.num_tasks = 1
self.num_tasks_per_node = 1
self.sanity_patterns = sn.assert_found(r'SUCCESS', self.stdout)
Expand All @@ -36,9 +44,29 @@ def __init__(self, lang, linkage):
self.tags = {'production'}

def setup(self, partition, environ, **job_opts):
if (self.current_system.name == 'kesch' and
environ.name == 'PrgEnv-cray-nompi'):
self.modules = ['netcdf/4.4.1.1-gmvolf-17.02',
'netcdf-c++/4.3.0-gmvolf-17.02',
'netcdf-fortran/4.4.4-gmvolf-17.02']
self.build_system.cppflags = [
'-I$EBROOTNETCDF/include',
'-I$EBROOTNETCDFMINCPLUSPLUS/include',
'-I$EBROOTNETCDFMINFORTRAN/include'
]
self.build_system.ldflags = [
'-L$EBROOTNETCDF/lib',
'-L$EBROOTNETCDFMINCPLUSPLUS/lib',
'-L$EBROOTNETCDFMINFORTRAN/lib',
'-L$EBROOTNETCDF/lib64',
'-L$EBROOTNETCDFMINCPLUSPLUS/lib64',
'-L$EBROOTNETCDFMINFORTRAN/lib64',
'-lnetcdf', '-lnetcdf_c++4', '-lnetcdff'
]

# NOTE: Workaround to fix static linking for C++ with PrgEnv-pgi
if (environ.name == 'PrgEnv-pgi' and
self.lang == 'cpp'and
self.lang == 'cpp' and
self.linkage == 'static'):
self.build_system.ldflags += ['-lstdc++']

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