prepare files for website

[floesche]

first steps for https://reiserlab.github.io/Modular-LED-Display/

[floesche]

This will put the documentation in some preliminary structure. Can be changed later.

[mbreiser]

Thanks @floesche — merged.

A couple of quick FYIs (no action needed unless you want to):

1. Five sibling pages under "MATLAB Tools" share nav_order: 20 (experiment_pipeline_guide, pattern_library_convention, pattern_tools_quickstart, sd_card_deployment_notes, yaml_protocol_documentation), so Just-the-Docs will sort them alphabetically. If you'd like a specific order, distinct values (e.g., 20/30/40/50/60) would do it — happy either way.

2. Pushed two small follow-ups on main:

   • Added matching front matter to patterns/README.md so it joins the section (nav_order: 70).
   • Trimmed two stale "See also" bullets at the bottom of g6_quickstart.md that pointed to docs/g6_migration_plan.md (moved to docs/development/) and docs/g6_led_mapping.md (doesn't exist yet).

Let me know if you'd rather adjust either.

[floesche]

Thanks @mbreiser.

Re 1: I set the nav_order to the same value since I didn't have a preference about the order when I added the pages and was fine with the alphabetic order. If you have a preference, please feel free to give matching values.

Re 2: I am currently ignoring README.md for the website and instead have them as "landing pages" when you go to the repository itself. I would usually create a separate landing page for the website. In my idea, the README.md would contain a condensed version of everything about the repository (or folder in your case) in one file, while a webpage landing page would guide the reader through the rest of the documentation pages. I recommend creating a separate docs/pattern.md file instead, at this point with content very similar to the README.md.

[mbreiser]

Thanks @floesche, that makes sense. Pushed a51fe18 — reverted the front matter on patterns/README.md and added a dedicated docs/patterns.md per your suggestion, so the README stays repo-internal and the unified site has its own page.

Re: 1, no preference on order, alphabetical is fine.