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seqboost

  • implementing a graph neural network for the layered and directed graphs as you will find in the metabolomics and proteomics.
  • I crated a Graph Neural Network as in Python there is Deep graph Library which can do in few lines if you know how to read graphs.
  • In RUST, there is no such, so I wrote using Burn this evening. Burn is an awesome crate, you can do everything.
  • I made a function that reads the edges and the nodes from the file and returns a adjancency matrix.
  • This can be changed with the use of the required nodes, however the Graph neural network class remains the same.

Gaurav Sablok
codeprog@icloud.com

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