feat: add incidence matrix functions#89
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Neclow merged 10 commits intosbhattlab:mainfrom Jul 4, 2025
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Calculate the incidence matrix of phylo2vec vectors. This can be computed as a dense matrix or using several sparse approaches: COO, CSR, CSC (available in Rust/R/Python) or DOK (rust only).
Add
scipyas a dependency in the pixi.toml to test the sparse formats.Closes #85 as adjacency matrices won't be implemented for now.