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Fix table parameter visium reader #341

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Merged
merged 2 commits into from
Nov 3, 2025
Merged

Fix table parameter visium reader #341

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2d21dc8
fix table parameter visium reader
LucaMarconato Nov 3, 2025
20ca630
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Nov 3, 2025
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3 changes: 3 additions & 0 deletions .gitignore
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Original file line number Diff line number Diff line change
Expand Up @@ -36,5 +36,8 @@ node_modules/
.code-workspace

# test datasets (e.g. Xenium ones)
# symlinks
data
# data folder
data/
tests/data
2 changes: 1 addition & 1 deletion src/spatialdata_io/readers/visium.py
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Expand Up @@ -253,7 +253,7 @@ def visium(
rgb=None,
)

return SpatialData(images=images, shapes=shapes, table=table)
return SpatialData(images=images, shapes=shapes, tables={"table": table})


def _read_image(image_file: Path, imread_kwargs: dict[str, Any]) -> Any:
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