v0.5.0 [Escherichia coli]

Major update! Implementing the core pipeline functionality

Added

• NetworkGroup class represents a group of networks
• Config class to extract, process and store pipeline settings
• Command class is a wrapper for running subprocesses
• Process class for executing a pipeline process
• Pipeline class defines the pipeline and methods to run the pipeline
• Environments class that creates, lists and loads conda environments
• Logging functionality
• CLI interface for mindpipe