feat: add a conda profile and environment file#3
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seqwellBioinfo merged 11 commits intomainfrom Nov 22, 2024
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clintval
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Nov 21, 2024
| channels: | ||
| - conda-forge | ||
| - bioconda | ||
| - defaults |
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Thank you! Good to drop defaults with the recent Anaconda debacle.
clintval
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Nov 22, 2024
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The example can be run with:
nextflow run \ -profile conda \ main.nf \ -c nextflow.config \ --pool_sheet "${PWD}/tests/pool_sheet.csv" \ --output "${PWD}/test_output" \ -with-report \ -with-trace \ -resumeNote, this must be done in a linux environment because Lima does not have any Mac build available.