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Commits on Mar 31, 2026

• build(deps): bump golang.org/x/image from 0.18.0 to 0.38.0 (#574)

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Commits on Feb 27, 2026

• fix docs

  shenwei356

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  d13b5fa

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• fix help message

  shenwei356

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• split/split2: add a new option -P/--out-prefix to override --by-*-prefix. #563

  shenwei356

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Commits on Feb 9, 2026

• seqkit: add suport of reading and writing LZ4 compression format

  shenwei356

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• restart: support specifying the starting sequence of circular genomes

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Commits on Feb 5, 2026

• seq: add flags to specify sequences to operate/transform. #568

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Commits on Jan 24, 2026

• fix detecting file format type for FASTQ records with empty sequences. #569

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Commits on Jan 9, 2026

• update changelog

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• Bufixes in the BAM toolbox (#567)

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  botond-sipos

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Commits on Jan 4, 2026

• seqkit sample/sample2: update docs #566

  shenwei356

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• Introducing sample2: fix potential sampling bias issue and ensure deterministic `-n` behavior (#566)

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Commits on Jan 2, 2026

• sample: add -r/--non-deterministic. #565

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Commits on Dec 30, 2025

• shuffle: add -r/--non-deterministic. #565

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Commits on Dec 19, 2025

• shuffle: add --tmp-dir. #562

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Commits on Dec 4, 2025

• fix typo

  shenwei356

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• v2.12.0

  shenwei356

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• replace: {uuid}: use UUID v7 to replace v4

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Commits on Dec 3, 2025

• grep: supports search empty id/seq. #558

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Commits on Nov 24, 2025

• fix #554

  shenwei356

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Commits on Nov 20, 2025

• fix calling rand.New

  shenwei356

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• v2.11.0

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• build(deps): bump golang.org/x/crypto from 0.35.0 to 0.45.0 (#553)

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Commits on Nov 19, 2025

• replace: add a new replacement symbol {uuid} for random UUID

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Commits on Oct 30, 2025

• fix reading records with both empty id and sequence. #550

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Commits on Oct 17, 2025

• fix typo

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• Merge branch 'master' of github.com:shenwei356/seqkit

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• head: add a new flag -l/--length to print leading FASTA/Q records with total sequence length >= N. #548

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Commits on Oct 7, 2025

• Fix typo (#542)

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  bounlu

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Commits on Sep 26, 2025

• check if the output file name equals to one of the input files. #541

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• check if the output file name equals to one of the input files. #541

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Commits on Sep 16, 2025

• sana: improve handling of blank lines. (#540)

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Commits on Aug 29, 2025

• build(deps): bump github.com/ulikunitz/xz from 0.5.11 to 0.5.14 (#537)

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Commits on Aug 28, 2025

• split2: new flag -N, --seqid-as-filename

  shenwei356

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Commits on Aug 19, 2025

• fix docs

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