Root package missing in topo order?

[RichDom2185]

Seems like that's the cause of all the dependency updates failing (since they only touch the lockfile)

[RichDom2185]

@leeyi45 are you able to take a look?

[leeyi45]

I'll go around tidying things up.

Let me investigate this issue. I think the issue is that I'm not checking for dependencies from within the repository only