FRmatch is a cell type cluster mapping algorithm for single cell RNA-sequencing (scRNA-seq) data. The core method is based on a statistical test called Friedman-Rafsky (FR) test, which is a multivariate non-parametric test. This package implements the core algorithms and companion visualization tools for the method. frmatch-docker provides Docker files and GitHub Action workflows for building and publishing a Docker image so that frmatch-docker can be used in Nextflow workflows.
To build your image from the command line:
- You can do this on Google shell since docker is installed and available.
bash build.shTo test this tool from the command line:
bash test.shNote: testing done by following guidelines here
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