Skip to content

First official release (v2026.4.6)

Latest
Latest

Choose a tag to compare

View all tags
@lsetiawan lsetiawan released this 06 Apr 18:32
· 37 commits to main since this release
v2026.4.6
e3ed4de
This commit was created on GitHub.com and signed with GitHub’s verified signature.
GPG key ID: B5690EEEBB952194
Verified
Learn about vigilant mode.

What's Changed

✨ Features

API & Webservice

  • FastAPI hello-world endpoint and coverage test (#38)
  • Complete webservice namespace package with full CRUD endpoints (#68)
  • API foundation (#105)
  • JWT authentication for webservice (#139)
  • Query data model views instead of rebuilding joins (#159)
  • API implementation improvements (#170)
  • Availability discovery endpoints with full test coverage (#197)
  • Per-client API keys with per-key rate limiting (#248)
  • Redirect root to /docs (#241)

ETL & Data Pipelines

  • Peter's ETL Pipeline merge (#26)
  • Pixi ETL environment configuration (#37)
  • Prefect implementation and directory reorganization (#53)
  • USDA Census ETL (#106)
  • SQL-first workflow with PgSchema, MatViews, and ETL (#108)
  • USDA Survey ETL (#116)
  • Feedstock analysis (#117)
  • Billion Ton 2023 Agricultural ETL pipeline (#121)
  • Comprehensive analytical suite ETL — ICP, XRF, Calorimetry, XRD (#123)
  • USDA manual fixes (#124)
  • USDA crop normalization and api_name transition groundwork (#155)
  • Aim 2 Fermentation ETL and analytical view refinement (#154)
  • Expanded USDA commodity mappings and mapping system improvements (#173)
  • Gasification ETL pipeline (#217)
  • Data Portal schema with views (#220)
  • Grant biocirv_read_only access to Data Portal schema (#243)

Data Models & Database

  • Migrate datamodels from LinkML to SQLModel with Alembic (#112)
  • Add resource_info assets and GitHub Pages site (#114)
  • Cloud staging database (#75)
  • Add pg_trgm, unaccent, and btree_gin PostgreSQL extensions (#129)

Infrastructure & Deployment

  • GCP backend and cloud documentation (#78)
  • Migrate infrastructure-as-code from OpenTofu to Pulumi Python (#110)
  • GCP staging deployment via Pulumi + Cloud Run (#125)
  • Seed admin user via Pulumi and Cloud Run job (#175)
  • Automate GCP staging deployment via GitHub Actions (#189)
  • Pull Cloud Run images from GHCR instead of GCR (#192)
  • Parameterize infrastructure for multi-environment deployment (#203)
  • oauth2-proxy for Prefect UI auth — local (#221) and Cloud Run (#222)
  • Rename auth-proxy to prefect-auth and skip login page (#223)
  • Trigger ETL pipeline automatically after staging deploy (#216)
  • Bootstrap production environment alongside staging (#228)
  • Trigger ETL workflow for production (#238)
  • Wait for docker-build before deploying production (#240)
  • Create biocirv_bucket GCS bucket (#202)
  • PyPI releases for namespace packages (#151)

Tooling & Developer Experience

  • AGENTS.md and Copilot environment setup (#31)
  • GitHub Codespaces devcontainer configuration (#51)
  • Freeform general issue template (#130)

🏗️ CI / Build

  • Add CI/CD actions (#25)
  • Lint codebase to pass pre-commit (#33)
  • Bump pixi version from v0.59.0 to v0.63.2 (#150)
  • Alembic migrations validation workflow (#164)
  • Update workflow paths for Docker build triggers (#195)
  • Path filters for CD workflow on namespace packages (#200)
  • Remove pixi lock file (#185)
  • Fix Docker builds broken by pixi lock file removal (#187)
  • Clean old artifacts (#111)
  • Update frontend submodule to latest main (#183)
  • Add GitHub frontend submodule (#49)

📚 Documentation

  • Create LICENSE (#10)
  • Community health files (#24)
  • Consolidate documentation and configure MkDocs for Read the Docs (#67)
  • Local setup guide and MkDocs config updates (#85)
  • Update documentation and rendering (#142)
  • Streamline namespace package READMEs for PyPI (#184)
  • Package CONTRIBUTING guides and repo URL updates (#188)
  • Overhaul README for Zenodo publication (#237)
  • Update contributing links and add alembic to docker-build triggers (#245)
  • Update copyright year in LICENSE (#250)
  • Add SECURITY.md, CHANGELOG.md, and adopt CalVer (#253)
  • Add CITATION.cff (#251)
  • Revise README with new badges and acknowledgments (#252)
  • Berkeley upstream integration (#84)

New Contributors

Full Changelog: https://github.com/sustainability-software-lab/ca-biositing/commits/v2026.4.6

Contributors

avi9664, tylerhuntington, and 4 other contributors
Assets 2
Loading