MWG_deconvolution

R code to perform deconvolution of transcriptomic and proteomic data

Partial deconvolution using available signatures

• Cibersort on Abbas dataset
  
  R code: [MD], CIBERSORT count: [RDA]

• Cibersort on EM131 dataset
  
  R code: [MD], CIBERSORT count: [RDA]

Partial deconvolution using available proportions

• csfit on Abbas dataset
  
  R code: [MD]

Complete deconvolution from globas expression

• deconf on Abbas dataset
  
  R code: [MD]