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v1.6.3: Add Python versions 3.13 and 3.14 to CI workflow (#828)
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@Adamtaranto Adamtaranto tagged this 02 Mar 05:22 
* Add Python versions 3.13 and 3.14 to CI workflow

Upper limit removed in #826

* Migrate ete3 → ete4 for Python 3.13+ compatibility (#829)

* Initial plan

* Migrate from ete3 to ete4 for Python 3.13+ compatibility

Co-authored-by: tanghaibao <106987+tanghaibao@users.noreply.github.com>

* Style fixes by Black

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Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: tanghaibao <106987+tanghaibao@users.noreply.github.com>

* Fix bam2mat tests failing on Python 3.13 due to pysam iterator ValueError (#830)

* Initial plan

* Fix bam2mat ValueError with Python 3.13 + pysam + pytest-cov

Co-authored-by: tanghaibao <106987+tanghaibao@users.noreply.github.com>

---------

Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: tanghaibao <106987+tanghaibao@users.noreply.github.com>

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Co-authored-by: Copilot <198982749+Copilot@users.noreply.github.com>
Co-authored-by: tanghaibao <106987+tanghaibao@users.noreply.github.com>
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