MAINT: Run black on the whole tree

MANIFEST.in

@@ -1,6 +1,7 @@
 # data
 include templateflow/conf/config.json
 include templateflow/conf/templateflow-skel.zip
+include templateflow/conf/templateflow-skel.md5
 
 # misc
 include requirements.txt

docs/conf.py

@@ -16,12 +16,12 @@
 
 from templateflow import __version__, __copyright__, __packagename__
 
-sys.path.append(os.path.abspath('sphinxext'))
+sys.path.append(os.path.abspath("sphinxext"))
 
 # -- Project information -----------------------------------------------------
 project = __packagename__
 copyright = __copyright__
-author = 'The TemplateFlow Developers'
+author = "The TemplateFlow Developers"
 
 # The short X.Y version
 version = Version(__version__).public
@@ -31,29 +31,29 @@
 
 # -- General configuration ---------------------------------------------------
 extensions = [
-    'sphinx.ext.autodoc',
-    'sphinx.ext.doctest',
-    'sphinx.ext.intersphinx',
-    'sphinx.ext.coverage',
-    'sphinx.ext.mathjax',
-    'sphinx.ext.ifconfig',
-    'sphinx.ext.viewcode',
-    'sphinx.ext.githubpages',
-    'sphinxcontrib.apidoc',
-    'sphinxcontrib.napoleon'
+    "sphinx.ext.autodoc",
+    "sphinx.ext.doctest",
+    "sphinx.ext.intersphinx",
+    "sphinx.ext.coverage",
+    "sphinx.ext.mathjax",
+    "sphinx.ext.ifconfig",
+    "sphinx.ext.viewcode",
+    "sphinx.ext.githubpages",
+    "sphinxcontrib.apidoc",
+    "sphinxcontrib.napoleon",
 ]
 
 autodoc_mock_imports = [
-    'matplotlib',
-    'nilearn',
-    'nipy',
-    'nitime',
-    'numpy',
-    'pandas',
-    'seaborn',
-    'skimage',
-    'svgutils',
-    'transforms3d',
+    "matplotlib",
+    "nilearn",
+    "nipy",
+    "nitime",
+    "numpy",
+    "pandas",
+    "seaborn",
+    "skimage",
+    "svgutils",
+    "transforms3d",
 ]
 
 # Accept custom section names to be parsed for numpy-style docstrings
@@ -62,21 +62,21 @@
 # https://github.com/sphinx-contrib/napoleon/pull/10 is merged.
 napoleon_use_param = False
 napoleon_custom_sections = [
-    ('Inputs', 'Parameters'),
-    ('Outputs', 'Parameters'),
+    ("Inputs", "Parameters"),
+    ("Outputs", "Parameters"),
 ]
 
 # Add any paths that contain templates here, relative to this directory.
-templates_path = ['_templates']
+templates_path = ["_templates"]
 
 # The suffix(es) of source filenames.
 # You can specify multiple suffix as a list of string:
 #
 # source_suffix = ['.rst', '.md']
-source_suffix = '.rst'
+source_suffix = ".rst"
 
 # The master toctree document.
-master_doc = 'index'
+master_doc = "index"
 
 # The language for content autogenerated by Sphinx. Refer to documentation
 # for a list of supported languages.
@@ -89,8 +89,12 @@
 # directories to ignore when looking for source files.
 # This pattern also affects html_static_path and html_extra_path.
 exclude_patterns = [
-    '_build', 'Thumbs.db', '.DS_Store',
-    'api/modules.rst', 'api/templateflow.rst']
+    "_build",
+    "Thumbs.db",
+    ".DS_Store",
+    "api/modules.rst",
+    "api/templateflow.rst",
+]
 
 # The name of the Pygments (syntax highlighting) style to use.
 pygments_style = None
@@ -101,7 +105,7 @@
 # The theme to use for HTML and HTML Help pages.  See the documentation for
 # a list of builtin themes.
 #
-html_theme = 'sphinx_rtd_theme'
+html_theme = "sphinx_rtd_theme"
 
 # Theme options are theme-specific and customize the look and feel of a theme
 # further.  For a list of options available for each theme, see the
@@ -112,7 +116,7 @@
 # Add any paths that contain custom static files (such as style sheets) here,
 # relative to this directory. They are copied after the builtin static files,
 # so a file named "default.css" will overwrite the builtin "default.css".
-html_static_path = ['_static']
+html_static_path = ["_static"]
 
 # Custom sidebar templates, must be a dictionary that maps document names
 # to template names.
@@ -128,7 +132,7 @@
 # -- Options for HTMLHelp output ---------------------------------------------
 
 # Output file base name for HTML help builder.
-htmlhelp_basename = 'templateflowdoc'
+htmlhelp_basename = "templateflowdoc"
 
 
 # -- Options for LaTeX output ------------------------------------------------
@@ -137,15 +141,12 @@
     # The paper size ('letterpaper' or 'a4paper').
     #
     # 'papersize': 'letterpaper',
-
     # The font size ('10pt', '11pt' or '12pt').
     #
     # 'pointsize': '10pt',
-
     # Additional stuff for the LaTeX preamble.
     #
     # 'preamble': '',
-
     # Latex figure (float) alignment
     #
     # 'figure_align': 'htbp',
@@ -155,19 +156,21 @@
 # (source start file, target name, title,
 #  author, documentclass [howto, manual, or own class]).
 latex_documents = [
-    (master_doc, 'templateflow.tex', 'TemplateFlow Documentation',
-     'The TemplateFlow Developers', 'manual'),
+    (
+        master_doc,
+        "templateflow.tex",
+        "TemplateFlow Documentation",
+        "The TemplateFlow Developers",
+        "manual",
+    ),
 ]
 
 
 # -- Options for manual page output ------------------------------------------
 
 # One entry per manual page. List of tuples
 # (source start file, name, description, authors, manual section).
-man_pages = [
-    (master_doc, 'templateflow', 'TemplateFlow Documentation',
-     [author], 1)
-]
+man_pages = [(master_doc, "templateflow", "TemplateFlow Documentation", [author], 1)]
 
 
 # -- Options for Texinfo output ----------------------------------------------
@@ -176,9 +179,15 @@
 # (source start file, target name, title, author,
 #  dir menu entry, description, category)
 texinfo_documents = [
-    (master_doc, 'templateflow', 'TemplateFlow Documentation',
-     author, 'TemplateFlow', 'One line description of project.',
-     'Miscellaneous'),
+    (
+        master_doc,
+        "templateflow",
+        "TemplateFlow Documentation",
+        author,
+        "TemplateFlow",
+        "One line description of project.",
+        "Miscellaneous",
+    ),
 ]
 
 
@@ -197,21 +206,21 @@
 # epub_uid = ''
 
 # A list of files that should not be packed into the epub file.
-epub_exclude_files = ['search.html']
+epub_exclude_files = ["search.html"]
 
 
 # -- Extension configuration -------------------------------------------------
 
-apidoc_module_dir = '../templateflow'
-apidoc_output_dir = 'api'
-apidoc_excluded_paths = ['conftest.py', '*/tests/*', 'tests/*', 'data/*']
+apidoc_module_dir = "../templateflow"
+apidoc_output_dir = "api"
+apidoc_excluded_paths = ["conftest.py", "*/tests/*", "tests/*", "data/*"]
 apidoc_separate_modules = True
-apidoc_extra_args = ['--module-first', '-d 1', '-T']
+apidoc_extra_args = ["--module-first", "-d 1", "-T"]
 
 # -- Options for intersphinx extension ---------------------------------------
 
 # Example configuration for intersphinx: refer to the Python standard library.
-intersphinx_mapping = {'https://docs.python.org/': None}
+intersphinx_mapping = {"https://docs.python.org/": None}
 
 # -- Options for versioning extension ----------------------------------------
 scv_show_banner = True