build(deps): unified dependabot bump across workspace#69
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Closes the following Dependabot PRs in one shot so the lockfile only has to resolve once: - @aws-sdk/client-sagemaker-runtime 3.1035.0 → 3.1043.0 (#67) - fast-xml-parser 5.7.2 → 5.7.3 (#66) - @aws-sdk/client-bedrock-runtime 3.1040.0 → 3.1043.0 (#65) - lru-cache 11.3.5 → 11.3.6 (#63) - yaml 2.8.3 → 2.8.4 (#62) - @commitlint/config-conventional 20.5.0 → 20.5.3 (#60) - zod 4.3.6 → 4.4.3 (#59) - snyk-nodejs-lockfile-parser 2.7.0 → 2.7.1 (#57) - onnxruntime-node 1.24.3 → 1.25.1 (#56) - @biomejs/biome 2.4.13 → 2.4.14 (#55)
Both vulnerable packages are pinned by @modelcontextprotocol/sdk@1.29.0 (hono via @hono/node-server, ip-address via express-rate-limit). Adding pnpm overrides to force the patched versions without bumping the MCP SDK itself. - hono <4.12.16 → 4.12.16 (GHSA-69xw-7hcm-h432 CVSS 4.7, GHSA-9vqf-7f2p-gf9v CVSS 6.5) - ip-address <10.1.1 → 10.1.1 (GHSA-v2v4-37r5-5v8g CVSS 5.3)
…overrides" This reverts commit 05327f0.
… overrides" This reverts commit feca783.
theagenticguy
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May 10, 2026
## Summary One PR that takes in all 10 open Dependabot bumps so pnpm-lock only has to resolve once. All versions match the Dependabot PRs exactly. Bumps are drops-in — no code changes needed. ### Closes - Closes #67 — `@aws-sdk/client-sagemaker-runtime` 3.1035.0 → 3.1043.0 (`packages/embedder`) - Closes #66 — `fast-xml-parser` 5.7.2 → 5.7.3 (`packages/ingestion`) - Closes #65 — `@aws-sdk/client-bedrock-runtime` 3.1040.0 → 3.1043.0 (`packages/ingestion`, `summarizer`, `wiki`) - Closes #63 — `lru-cache` 11.3.5 → 11.3.6 (`packages/mcp`) - Closes #62 — `yaml` 2.8.3 → 2.8.4 (`packages/frameworks`, `sarif`, `cli`, `policy`) - Closes #60 — `@commitlint/config-conventional` 20.5.0 → 20.5.3 (root devDep) - Closes #59 — `zod` 4.3.6 → 4.4.3 (`packages/frameworks`, `mcp`, `sarif`, `policy`, `summarizer`) - Closes #57 — `snyk-nodejs-lockfile-parser` 2.7.0 → 2.7.1 (`packages/ingestion`) - Closes #56 — `onnxruntime-node` 1.24.3 → 1.25.1 (`packages/embedder`) - Closes #55 — `@biomejs/biome` 2.4.13 → 2.4.14 (root devDep) Mise pins (`node = "22"`, `pnpm = "10.33.2"`, `python = "3.12"`, `uv = "latest"`) left alone — none of the Dependabot PRs touch them and a pnpm 10→11 jump would be a major change out of scope. ## Test plan - [x] `pnpm install` resolves cleanly, lockfile regenerates without workarounds - [x] `pnpm -r clean && pnpm -r build` succeeds (all workspace packages build) - [x] `pnpm -r exec tsc --noEmit` passes (14 stale-`dist` errors in `packages/search` were pre-existing on main before a fresh build and clear after) - [x] `pnpm -r test` passes (225 CLI tests + 150 MCP tests + rest; the 2 earlier MCP failures were stale `dist/tools/pack-codebase.test.js` leftovers from a prior branch's build and disappeared after `pnpm -r clean`) - [x] `pnpm run lint` passes (biome 2.4.14 surfaces 6 warnings / 1 info on existing test code, non-blocking) - [x] `pnpm run banned-strings` passes - [x] `lefthook` pre-commit + commit-msg + pre-push hooks all green ## Notes - Root `pnpm.onlyBuiltDependencies` was **not** touched by this change — preserved `onnxruntime-node`, `@duckdb/node-api`, tree-sitter natives, etc. exactly as they were. - The `fast-xml-parser@<5.7.0: 5.7.1` override is still in `package.json` for transitive resolution of older versions — left intact.
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Summary
One PR that takes in all 10 open Dependabot bumps so pnpm-lock only has to resolve once. All versions match the Dependabot PRs exactly. Bumps are drops-in — no code changes needed.
Closes
@aws-sdk/client-sagemaker-runtime3.1035.0 → 3.1043.0 (packages/embedder)fast-xml-parser5.7.2 → 5.7.3 (packages/ingestion)@aws-sdk/client-bedrock-runtime3.1040.0 → 3.1043.0 (packages/ingestion,summarizer,wiki)lru-cache11.3.5 → 11.3.6 (packages/mcp)yaml2.8.3 → 2.8.4 (packages/frameworks,sarif,cli,policy)@commitlint/config-conventional20.5.0 → 20.5.3 (root devDep)zod4.3.6 → 4.4.3 (packages/frameworks,mcp,sarif,policy,summarizer)snyk-nodejs-lockfile-parser2.7.0 → 2.7.1 (packages/ingestion)onnxruntime-node1.24.3 → 1.25.1 (packages/embedder)@biomejs/biome2.4.13 → 2.4.14 (root devDep)Mise pins (
node = "22",pnpm = "10.33.2",python = "3.12",uv = "latest") left alone — none of the Dependabot PRs touch them and a pnpm 10→11 jump would be a major change out of scope.Test plan
pnpm installresolves cleanly, lockfile regenerates without workaroundspnpm -r clean && pnpm -r buildsucceeds (all workspace packages build)pnpm -r exec tsc --noEmitpasses (14 stale-disterrors inpackages/searchwere pre-existing on main before a fresh build and clear after)pnpm -r testpasses (225 CLI tests + 150 MCP tests + rest; the 2 earlier MCP failures were staledist/tools/pack-codebase.test.jsleftovers from a prior branch's build and disappeared afterpnpm -r clean)pnpm run lintpasses (biome 2.4.14 surfaces 6 warnings / 1 info on existing test code, non-blocking)pnpm run banned-stringspasseslefthookpre-commit + commit-msg + pre-push hooks all greenNotes
pnpm.onlyBuiltDependencieswas not touched by this change — preservedonnxruntime-node,@duckdb/node-api, tree-sitter natives, etc. exactly as they were.fast-xml-parser@<5.7.0: 5.7.1override is still inpackage.jsonfor transitive resolution of older versions — left intact.