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5 changes: 4 additions & 1 deletion diffxpy/testing/tests.py
Original file line number Diff line number Diff line change
Expand Up @@ -694,7 +694,10 @@ def wald(
as_numeric=as_numeric
)
else:
coef_loc_names = dmat_loc.columns.tolist()
if isinstance(dmat_loc, patsy.design_info.DesignMatrix):
coef_loc_names = dmat_loc.design_info.column_names
else:
coef_loc_names = dmat_loc.columns.tolist()
if not np.all([x in coef_loc_names for x in coef_to_test]):
raise ValueError(
"the requested test coefficients %s were found in model coefficients %s" %
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4 changes: 1 addition & 3 deletions docs/tutorials.rst
Original file line number Diff line number Diff line change
Expand Up @@ -36,9 +36,7 @@ Diffxpy allows you to define a data set partition and to conduct test on each ge
Multiple tests per gene
~~~~~~~~~~~~~~~~~~~~~~~

How to perform `pairwise <https://nbviewer.jupyter.org/github/theislab/diffxpy_tutorials/tree/master/diffxpy_tutorials/test/multiple_tests_per_gene.ipynb>`__ tests.

How to perform group tests versus all other groups (versus `rest <https://nbviewer.jupyter.org/github/theislab/diffxpy_tutorials/tree/master/diffxpy_tutorials/test/multiversus_rest.ipynb>`__).
How to perform `pairwise tests, group versus rest tests and tests within each parition <https://nbviewer.jupyter.org/github/theislab/diffxpy_tutorials/tree/master/diffxpy_tutorials/test/multiple_tests_per_gene.ipynb>`__ tests.


Gene set enrichment: enrich
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