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update heterotachy document
reformat
fix links
Update Home.md and tables
add tutorial about inferring site rates
add big data tutorial
update constrained search tutorial
major modifications with ModelFinder
update
update doc for ver 1.5.0
update headings
Heiko suggestions
add heterotachy model document
docids
update rate heterogeneity command reference
help for -lmap ALL
some formatting added to likelihood mapping in the Command-Reference
another comment added to -wql in the Command-Reference
likelihood mapping updated in the Command-Reference
doctoc
update command for 1.4.0
update command after Karen's comment
updated by Lars comments