16s rRNA Sequencing Meta-analysis Reproducibility Tool (using mothur).
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Updated
Nov 26, 2022 - Python
16s rRNA Sequencing Meta-analysis Reproducibility Tool (using mothur).
Next Generation Phylogenetic Microbiome Analysis Framework
Chloroplast 16S removal from Metagenomics samples (or any NGS samples)
A novel taxonomy-independent deep learning microbiome approach allow for accuaret classification of human epithelial materials
List of sequencer runs; QC and run Info from each run, modular display of all existing (uploaded) types of info and statistics.
Prepare a report for taxonomic assignment based on 16S rRNA sequences, using BLAST.
The `crest4` python package can automatically assign taxonomic names to DNA sequences obtained from environmental sequencing.
A general 16S rDNA sequencing analysis pipeline
Reverse Complement PCR (RC-PCR_ Classification pipeline.
The `pacmill` python package is a bioinformatics pipeline that is developed to process microbial 16S amplicon sequencing data and produce PDF reports detailing taxonomical assignments along with other statistics.
A tool to identify and extract the commonly used ITS folding motifs from a 16s-23s rRNA sequence.
process raw reads from ubiome
The Microbial Co-occurrence Network Explorer
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