affine gap penalty local alignment and affine gap penalty global alignment
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Updated
Dec 18, 2017 - C++
affine gap penalty local alignment and affine gap penalty global alignment
Byte packing conversions using #pragma and C++
Research work on the search for tRNA-like sequences in the human genome. National Research Nuclear University MEPhI (Moscow Engineering Physics Institute)
Bioinformatics Data Structures & Algorithms [such as the Q-Gram Index, scoring alignments , rna-structure prediction, generating the BLAST-Ńeighborhood and more.]
Standard layout implementation of a tuple where the elements are aligned to a specified alignment.
A fully integrated K-mer Informed Toolkit for Bioinformatics
The GPU-version and MPI-version of PerM
Allocator for STL containers, which can allocate e.g. 16-byte aligned memory.
A collection of different byte padding methods
Aligned-memory allocator for C++ STL containers
MONKEY is a set of programs designed to search alignments of non-coding DNA sequence for matches to matrices representing the sequence specificity of transcription factors
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