A deep learning framework for multi-animal pose tracking.
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Updated
Aug 1, 2024 - Python
A deep learning framework for multi-animal pose tracking.
CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: https://git.io/ciatah_docs. Formerly known as calciumImagingAnalysis (ciapkg).
R code supporting Lavender et al. (in prep). patter: particle algorithms for animal tracking in R and Julia.
🛰🐦 Bird tracking - GPS tracking network for large birds
A package to understand OTN data
6 month, Intern-ship projet.
R package to access data from the European Tracking Network
fit latent variable movement models to animal tracking data
Dragonroost is an animal shelter / rescue management application, written in Python with Django.
Public repo for sharing teaching tutorials for image processing and kinematics data analysis. Other materials: animal locomotion data, images
LocoMote: AI-driven Sensor Tags for Fine-Grained Undersea Localization and Sensing
Animals detection in video using YOLO for detecting animals and OpenCV for tracking their movements and interactions.
Hybrid behavioral tracking combining deep learning-based tracking and fiducial tags
API for the Mid-Atlantic Acoustic Telemetry Observing System
PoseModel: An Open-Source Toolkit for Accurate and Robust Automated Behavioral Latent Embedding
An R package providing tools to visualize movement data (e.g. from GPS tracking) and temporal changes of environmental data (e.g. from remote sensing) by creating video animations.
R package for working with Wildlife Computers data formats. Maintained by Josh London (@jmlondon / josh.london@noaa.gov)
trackR - A simple video tracking software for R
Sample implementation of the Anitra data API client.
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