🌱 Designing CRISPRi experiments in bacteria
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Updated
Mar 23, 2024 - Python
🌱 Designing CRISPRi experiments in bacteria
analyzing bacterial genome based ontologies and phylogenomics informativeness
SNP calling pipeline using mccortex
PowerBacGWAS: Power calculations for Bacterial GWAS
bacterial strain identification
Workflow designed for Download, QC, Assemble, Variant calling, and Annotate bacterial WGS in batch
Analyzes the GC skew of bacterial chromosomes using multiple calculations. Outputs a data frame of GC skew values and wiggle files for visualization.
Snakemake workflow for processing Mycobacterium leprae whole genome sequencing data
interpro domain analyzer
Solutions for day-to-day computational problems in biological and health sciences.
Bacterial phenotype prediction from low pass sequencing using recommender systems and machine learning classifiers.
A Snakemake workflow assembling bacterial genomes according to the standard operating procedure in the Clavel Lab
DELEAT is a bioinformatic analysis pipeline for the design of large-scale genome deletions in bacterial genomes.
Bacterial swiss-army-knife pipeline for NGS data
bacterial genome deep learning using keras
Condense and summarize many results form PADLOC into CSV for heatmaps
Package for improving the functional annotation of bacterial genomes, classification of protein-coding sequences into clusters of orthologous groups, and visualization of the final annotated genome.
from trinity assembly to deep learning.
Bioinformatics
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