📔 Various bioinformatics tutorials

A collection of iPython notebooks exploring topics in Big Data

Open Scripts for data analysis in LabLog Electronic Lab Notebook

Learning notebook

BioJava examples in Jupyter Notebooks

IPython notebooks used for interactive learning

A jupyter notebook about DNA double strand break analysis from fluorescence images using Python

Different tasks from the field of data science applied on typical bioinformatic data. Mainly used packages are numpy and scipy and the code is organized in jupyter notebooks.

Container for blastn and Jupyter notebook

Gene Set Enrichment Analysis and Over Representation Analysis analysis using R

Jupyter notebook with a multimodal DBM example on SNP and gene expression data

Notebook for Honours project: Oral Campylobacter spp. and periodontal disease

User-friendly scripts and notebooks to parse chemistry and biology databases

Biopython Jupyter Notebook tutorial to characterize a small genome

SEEK API Library for Jupyter-Notebook

Use EMBL webservices directly from Jupyter Notebooks / JupyterLab. This repository is used by the EMBL-Tools JupyterLab extension

Official repository for the ComBINeS Meetup group. https://www.meetup.com/combines/. You can run the notebooks using the Data Hub Project or by manually installing all prerequisites. The Data Hub Project website is available at: https://data-hub.info service runs at: https://bio.data-hub.info - only a simple sing up is needed.

Code, notebooks, and resources for exploring and analyzing mechanistic knowledge graphs about 'rona

Examples using Clustergrammer2 to explore high-dimensional datasets.