GEne Cluster prediction with COnditional random fields.
zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)
lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters
Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)
lsaBGC - suite for pan-BGC-omics analysis
codoff: a program to measure the irregularity of the codon usage for a single genomic region (e.g. a BGC, phage, etc.) relative to the full genome.
Methods and classes to support Biosynthetic Gene Cluster analysis
Repository for data, code & figures related to the publication: "Natural products from reconstructed bacterial genomes of the Middle and Upper Paleolithic"
Parse binary files from Cblaster into more useful information (tree, table, pie chart)
biosynthetic-gene-clusters toolkit
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