LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.

Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.

Colocalization analysis of genetic association signals

An R package for conducting co-localization analysis. Edit

An ImageJ macro for 2D colocalization of IHC signals in ImageJ and counting RNAscope puncta within cells.

🧬High-performance genetics- and genomics-related data visualization using Makie.jl

This is a fork from qqman package

Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).

An automated tool for Object-based colocalization in fluorescence microscopy images.

echoverse module: Locus plot creation for fine-mapping and colocalization studies.

Bioinformatic software to identify causal variants in GWAS and GWAS/eQTL studies.

Preprocess, noise-reduction, threshold & quantify images to get box plots for each class (mainly cell cultures of different cel llines). Colocalization due to a naive trick of counting all overlapping signals/pixels. Could be done in ImageJ as well, but i thought this is better suited than fiddling with macros.

Analyses for the publication titled "Integrating disease and drug-related phenotypes for improved identification of pharmacogenomic variants"

Image processing desktop GUI tool to automate colocalization analysis across multiple channels on a fluorescence image

ImageJ scripts for analyzing nuclei intensity and overlap in brain sections

Colocalization metrics and distances for images or their sparse representations.

Methylation and mqtl analysis of the developing knee

Code for the PeerJ paper (colocr: an R package for conducting co-localization analysis on fluorescence microscopy images)

A shiny app for conducting co-localization analysis.