The Systems Biology Simulation Core Library (SBSCL) provides an efficient and exhaustive Java implementation of methods to interpret the content of models encoded in the Systems Biology Markup Language (SBML) and its numerical solution.

Genome-scale metabolic model of Methylococcus capsulatus.

Constraint-based metabolic modeling software from the Chandrasekaran Lab

Modeling the metabolic changes during the epithelial-to-mesenchymal transition.

Genome-scale metabolic reconstruction of Rhizophagus irregularis

This repository contains all changes made to the strain specific models of Corynebacterium striatum.

Memote-created repository for Rhodosporidium toruloides model iRhto