cytometry
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Data for Imaging Flow Cytometry
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Jun 26, 2020 - R
R scripts to reproduce analyses in our paper comparing clustering methods for high-dimensional cytometry data
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Feb 15, 2017 - R
The equivalent circuit model for a parallel electrode impedance cytometer is analyzed together with Maxwell's theory of homogenization of mixtures. It deals with both a modeling single and double shell.
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Jun 15, 2022 - MATLAB
Comparison of Dimensionality Reduction Techniques in CytoExploreR
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Apr 24, 2020
Autogating for gate 1 and gate 2 with U-Net.
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Nov 5, 2022 - Python
CyFlowRec is software for collecting FCS (Flow Cytometry Standard) files received via the serial port (RS232 serial interface) from a Partec flow cytometer sent via the TRANSFER function.
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May 24, 2024 - C
PICAFlow: a complete R workflow dedicated to flow/mass cytometry data, from data pre-processing to deep and comprehensive analysis.
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Mar 26, 2024 - R
Work done during rotation with Coleen McNamara & Stefan Bekiranov in UVA BIMS PhD program
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Feb 15, 2023 - Jupyter Notebook
An R Interactive Shiny Application for the Analysis of Imaging and Conventional Flow Cytometry
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Sep 15, 2023 - R
A meta-package to test pipelines of image processing tools and cytometry-style calibration.
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Jun 1, 2018 - Python
HDStIM: High Dimensional Stimulation Immune Mapping
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Oct 5, 2023 - R
Image Processing tools for Imaging Flow Cytometry
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Apr 15, 2024 - C++
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