Evolutionary genomics of chromosomal inversions in Atlantic herring
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Updated
Apr 22, 2024 - R
Evolutionary genomics of chromosomal inversions in Atlantic herring
Code & data relevant for someone interested in conducting multivariate models using Bayesian statistics in #R #MCMCGlmm. In our analyses here, we use data on eastern grey kangaroo juvenile behaviour and survival and maternal behaviour.
Scripts associated with understanding the genomic features of NLRs in Arabidopsis thaliana Col-0
Provides a means of running the Avida-ED educational software that guards against premature bit-rot.
Source code for ManyEcoEvo Manuscript
This directory contains code for the paper A phylogenomic framework for pelagiarian fishes (Acanthomorpha: Percomorpha) highlights mosaic radiation in the open ocean. If you want to run this code, I recommend downloading this code and the data directory from Data Dryad.
ColabSeq: The one-stop shop for all of your multiple sequence analysis needs.
Rcpp extension of eigvaldisp
R package for average evolvability measures
Working on my deliverables et al. for the Species & Speciation module in my Honours year (run by A/Prof Muthama Muasya)
Leo Blondel, Savandara Besse, Cassandra Extavour (2021)
Analysis of simulated genotype alignment data for use in CNN estimators (Johnson and Wilke, 2022)
Breitman Lab website
Source Code for cgenomicslab webpage
My slides for my lecture on biodiversity, evolution and taxonomy for a short course for high school biology teachers, organised by the University of Cape Town's Schools Development Unit
Pipeline for comparative transcriptomics across species
Easy-to-use C++ library for the live tracking of lineage and coalescence trees in individual-based forward-in-time simulations.
B+ A database of Positively Selected Sites discovered with ADOPS
My GitHub Page
Two-Tier Ensemble Aggregation Gene Co-expression Network (TEA-GCN): Capturing tissue/condition-specific co-expression from large transcriptomic datasets
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