Detecting contamination in NGS data and multi-species analysis
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Updated
Nov 4, 2024 - HTML
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fastq
Here are 8 public repositories matching this topic...
MerCat2: python code for versatile k-mer counting and diversity estimation for database independent property analysis for metaome data
python
diversity
plotly
protein
dask
fastq
k-mer-counting
k-mer-frequency
divideandconquer
metagenomic-analysis
metatranscriptomic-analysis
kmer-frequency-count
nucleotides
diversity-estimation
database-independent-analysis
multiomics
multiomics-data
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Updated
Jun 12, 2024 - HTML
A slurm based pipeline for RNA-seq analysis to execute on linux clusters. Feel free to connect to visualize your RNA-seq data on the clouds
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Updated
Nov 30, 2023 - HTML
A python package storing different tools for different NGS operations
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Updated
Sep 13, 2021 - HTML
Pipeline detecting pathogen DNA in sequencing data, specifically designed to differentiate between host (mouse) and pathogen genomes.
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Updated
Mar 10, 2024 - HTML
Classification of RNA-Seq samples using circRNA expression
machine-learning
rna-seq
multiqc
fastq
rna-seq-analysis
circrna
fastq-dump
circrna-prediction
fastqc
rna-seq-pipeline
fastp
rna-seq-classification
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Updated
Sep 19, 2018 - HTML
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