💾 📃 "Reads to report" for public health and clinical microbiology

Sync paired-end FASTA/Q files and keep singleton reads

Targeted Amplicon Bisulfite Sequencing Analysis Tool

Simple scripts for handling Unique Molecular Indexes in Fastq and Bam files

📦 Interleave and deinterleave FASTQ files. Streams and gzipped FASTQ files are accepted.

Various components for building RNA sequencing applications in Perl

Filter out sequences in FASTQ files that match a reference genome

A collection of code snippets and scripts related to my bioinformatics works

ECS 124 - Theory and Practice of Bioinformatics