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fine-mapping

Here are 5 public repositories matching this topic...

polyfun

omerwe / polyfun

PolyFun (POLYgenic FUNctionally-informed fine-mapping)

gwas statistical-genetics fine-mapping

Updated Jul 28, 2024
Python

mancusolab / sushie

Software to perform multi-ancestry SNP fine-mapping on molecular data

python gwas genetics bayesian-inference variational-inference eqtl susie jax fine-mapping pqtl

Updated Oct 27, 2024
Python

Jianhua-Wang / easyfinemap

user-friendly pipeline for GWAS fine-mapping

python gwas conditional ld gcta fine-mapping paintor clumping caviarbf

Updated Apr 17, 2024
Python

wugene / RADAR_SNP

Find risk snp in the LD region of GWAS snps by convolutional neural network

gwas snps deep-neural-networks imputation convolutional-neural-networks epigenomics 1000genomes fine-mapping

Updated Feb 28, 2019
Python

gil2rok / fine-mapping

Knowles Lab Research: determine which genetic variants cause a phenotype with non-binary functional annotations

computational-biology gradient-descent variational-inference functional-annotation fine-mapping

Updated Mar 9, 2023
Python

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