Perform a de-novo assembly of an unknown organism and report workflows and findings. Illumina PE 101x2, insert size 350bps +/- 50, PacBio long reads. Develop a Java program with a GUI to vizualise and report quality metrics for the best three assembly attempts.
Demo using Python/FastAPI/JS/jQuery/Bootstrap/ChartJS - (Backend + Frontend UI) framework with an input to add sequences, search for the 'G' Quadruplexes that displays the start & end positions in a table & a bar graph for better yield rate.
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