A Snakemake workflow for performing genomic region set and gene set enrichment analyses using LOLA, GREAT, and GSEApy.
-
Updated
Jun 6, 2024 - Python
A Snakemake workflow for performing genomic region set and gene set enrichment analyses using LOLA, GREAT, and GSEApy.
Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)
COVID-19 Crowd Generated Gene and Drug Set Library
An open-source webserver that allows for easy, reproducible genomics analyses between different webservers
Reference implementation of the paper Redundancy-aware unsupervised ranking based on game theory - application to gene enrichment analysis
GMT files for the mulea R package
A template package for integrating new pathway databases to ComPath
UVA DSI Capstone :: Gene Set Creation Algorithm for Microarray Studies with Low Sample Size
Add a description, image, and links to the gene-sets topic page so that developers can more easily learn about it.
To associate your repository with the gene-sets topic, visit your repo's landing page and select "manage topics."