Python library to facilitate genome assembly, annotation, and comparative genomics
-
Updated
Jun 8, 2024 - Python
Python library to facilitate genome assembly, annotation, and comparative genomics
Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs
Viral genomics analysis pipelines
H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)
TREDPARSE: HLI Short Tandem Repeat (STR) caller
Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data
Automated Tool for Global Screening Array analysis
Python program that reports nucleotide and dinucleotide frequencies of a genome
A crash course in scATAC-seq data processing
a genome reference estimation based on the peak size calibration coming from the flow cytometry
Bayesian Network Model Predicting Personal Phenotypes using Genome-Sequencing Data
genotype prepare for sequencing paltform.
A Python script that align SARS-CoV-2 genomes identifying and reporting pointwise variations.
ease of access gff files from tair for reading tair ids.
Python decoder for the HiC genome contact format
This repository on GitHub contains a Python program that uses data science techniques to calculate the percentage of cytosine and guanine in a genome sequence. Cytosine and guanine are two of the four nucleotide bases found in DNA, and their percentage can be used as a measure of the overall composition of a genome.
genome annotation analyzer for the microbiome analysis
Add a description, image, and links to the genome-sequencing topic page so that developers can more easily learn about it.
To associate your repository with the genome-sequencing topic, visit your repo's landing page and select "manage topics."