A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.
-
Updated
Jul 4, 2024 - C++
A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.
Kmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, etc.).
A compressed, associative, exact, and weighted dictionary for k-mers.
Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.
Comparison between different methods to simplify sequence data
subset and spaced seed design tool
Telomeric Repeat motif Identification tool with Short-read sequencing
fast and comprehensive k-mer counting package
A fork of the original https://github.com/medvedevgroup/UST tool.
K-mer indexing and querying in RNA-Seq data
Reference-free FASTQ filter for rare germline and somatic variants
Assembles a genome and finds true mutations among sequencing errors
Add a description, image, and links to the k-mer topic page so that developers can more easily learn about it.
To associate your repository with the k-mer topic, visit your repo's landing page and select "manage topics."