C++/CUDA implementation of some local thresholding algorithms for binarization
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Sep 8, 2023 - Cuda
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local-threshold
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A web application that use python script for image segmentation Thresholding: Optimal thresholding, Otsu, and spectral thresholding global and local thresholding. Unsupervised segmentation using k-means, segmentation using region growing, agglomerative and mean shift method.
threshold
image-segmentation
region-growing-segmentation
mean-shift
k-means-clustering
agglomerative-clustering
ostu-threshold
global-threshold
optimal-threshold
local-threshold
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Updated
May 3, 2023 - Jupyter Notebook
Part of MSc Biology Project (1/2). This repo contains three different analysis pipelines, which all analyse microscopy images of yeast cells. Two calculate Sfp1 NC ratios, and one calculates nuclear and whole-cell volumes.
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Jul 29, 2023 - Jupyter Notebook
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