FlexTaxD (Flexible Taxonomy Databases) - Create, add, merge different taxonomy sources (QIIME, GTDB, NCBI and more) and create metagenomic databases (kraken2, ganon and more )
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Updated
Nov 21, 2023 - Python
FlexTaxD (Flexible Taxonomy Databases) - Create, add, merge different taxonomy sources (QIIME, GTDB, NCBI and more) and create metagenomic databases (kraken2, ganon and more )
Accurate, resource-frugal and deterministic DNA sequence classifier.
TAXnomic Profile Aggregation and STAndardisation
🐴 CLinically Okay Metagenomic Pipeline 🐴
discover-virome: identify and quantify viruses from metagenomic assemblies
Lemur is a tool for rapid and accurate taxonomic profiling on long-read metagenomic datasets
The Genome Taxonomy Network for assigning microbial taxonomy to DNA sequences
XGBoost implementation for bacteria family identification
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