Microbiome Study of Lupus Patients
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Updated
May 3, 2018 - HTML
Microbiome Study of Lupus Patients
Analysis of drought metagenomic data using ENNB methods
A metagenome annotation workflow for UBC's Microbiology 405 course, Bioinformatics
🍰 Per sequence functional classification and taxonomic assignments
MAEP(Metagenomics Assebly Evaluation Pipeline).This pipeline is a new version of LAEP.
Anchor is a 16S rRNA gene amplicon pipeline for microbial analysis of multiple environmental samples.
💯 Snakemake-based amplicon processing protocol for 16S and ITS sequences.
How to analyze shotgun metagenomic data with phyloseq - a walkthrough
PuntSeq - Chasing the microbial diversity of Cambridge's freshwater
Open-source opinionated Galaxy-based framework for microbiota analysis
Personal Site for research pieces and other happenings in my life
Study of cyanobacterial harmful algal blooms in Lake Erie using autonomous sampling and DNA sequencing
Material used for a bioinformatics computer lab course, covering DNA/RNA sequence assembly and analysis, phylogenetic analysis, gene functional annotation, and metagenomic analysis
Collection of walkthrough tutorials on how to use Tweedieverse for differential analysis of omics data.
MetaStorm: A public webservice for the analysis and annotation of short sequence reads metagenomes
An interactive radial tree for functional hierarchies and omics data visualization
antibiotic resistance profiling of nanopore reads
Sequence-independent identification and removal of adapters/systemic contamination in shotgun sequencing data. https://doi.org/10.1093/bioinformatics/btac389
Pipeline to pull microbial reads from WGS data and perform metagenomic analysis
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