An analysis and visualization platform for 'omics data
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Updated
Jul 19, 2024 - Python
An analysis and visualization platform for 'omics data
Metagenomics and Metatranscriptomics pipeline
SortMeRNA: next-generation sequence filtering and alignment tool
Probe capture enrichment sequencing of amoA genes
Nextflow pipeline to detect and classify microbial reads in sequencing data from human samples.
ViewVir - A pipeline for viral diversity analysis
A tool for representing genomic potential and transcriptomic expression into KEGG pathways
Assembly and annotation of metatranscriptomic or metagenomic data for prokaryotic, eukaryotic and viruses.
A modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metagenomes
Repository for the presentation of work developed by the student Duarte Velho for the UC Project, of the Master in Bioinformatics of the University of Minho, academic year 23-24.
sensitive and precise assembly of short sequencing reads
Meta-Omics Software for Community Analysis
MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data
gNOMO2 allows integrated multi-omics analyses of microbiomes
deep neural networks on metagenomics transcriptomics and expression levels.
The Soil Virome Analysis Pipeline (SOVAP) is designed to process, analyze, and annotate viromics and metagenomics data using cutting-edge tools, providing valuable insights into the virome and microbial communities found in complex environments, such as soil ecosystems.
A pipeline for TotalRNA analysis
Interactive visualisation and data annotation for meta-omics data
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