A Snakemake workflow to analyse Illumina methylation arrays

Microarray data processing

Final project for "22100 R for Bio Data Science"

Nextflow pipeline for microarray and RNA-seq

Deconer: A Comprehensive and Systematic Cell Type Deconvolution Evaluator

Affy microarray processing

Chromosome Conformation Capture on Chip (4C): Data Processing. (Workflow/Scripts)

Multi Resolution Analysis of Tiling Arrays. (R package)

A workflow for gaining statistical insight via differential network analysis of microarray data

The AssayCorrector eliminates spatial bias in HTS assays using PMP methods.

Affymetrix GenomeWideSNP_6 processing using apt-copynumber-workflow (1.20.0)

Revisions to the GSEA-P R Application (Subramanian and Tamayo et al 2005)

A Snakemake workflow to analyse Affymetrix expression arrays

R script used for the preparation of the initial input file, i.e. merging of various studies by logFC (LogFC),

mimager: The microarray imager

R code to process GEO gene expression data

A Snakemake workflow to analyse Affymetrix expression arrays

Microarray Analysis of Differential Expression

R scripts for human and marine data analysis