nanopore
Here are 26 public repositories matching this topic...
Pipeline for hybrid assembly using short and long reads.
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Apr 18, 2019 - Nextflow
PathoPore - Longer Sequences and NextFlow Faster Analysis
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Nov 14, 2019 - Nextflow
See the main fork of this repository here >>> https://github.com/nf-core/nanoseq
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Nov 25, 2019 - Nextflow
Comprehensive pipeline for detection of TB from ONT adaptive sequencing and amplicon data.
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Nov 22, 2022 - Nextflow
UNDER CONSTRUCTION: Hybrid genome assembly pipeline using a combination of long and short sequencing reads
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Dec 19, 2022 - Nextflow
Course for ROPES summer school, May 2023
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May 17, 2023 - Nextflow
A Nextflow workflow for QC, evaluation, and profiling of metagenomic samples using short- and long-read technologies
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May 25, 2023 - Nextflow
Taxonomic profiling ONT metagenomics reads using minimap2
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Jul 6, 2023 - Nextflow
Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads
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Mar 6, 2024 - Nextflow
A pipeline to identify (and remove) certain sequences from raw genomic data. Default taxa to identify (and remove) are Homo and Homo sapiens. Removal is optional.
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May 9, 2024 - Nextflow
Pathogen whole genome sequence (WGS) data analysis pipeline
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May 2, 2024 - Nextflow
Nextflow pipeline to assemble genomes from nanopore reads.
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May 6, 2024 - Nextflow
Basic workflow for nanopore sequencing data
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May 9, 2024 - Nextflow
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