#

ontology

Here are 16 public repositories matching this topic...

aberHRML / classyfireR

R Interface to the ClassyFire REST API

cran database ontology metabolomics chemont classifiation inchi-key

Updated Dec 4, 2022
R

pcastellanoescuder / fobitools

📦 Tools for Manipulating FOBI Ontology

text-mining r ontology knowledge-graph metabolomics r-package nutrition enrichment-analysis obofoundry food-biomarker-ontology biological-significance-analysis biological-intrerpretation biological-knowledge

Updated May 6, 2024
R

pcastellanoescuder / fobitoolsGUI

🔎 Web-based Tool for Interacting with FOBI Ontology

visualization dataviz interactive ontology knowledge-graph metabolomics nutrition enrichment-analysis foods biomarkers fobi-visualization food-enrichment-analysis

Updated Jul 24, 2021
R

luckinet / ontologics

Code-Logics to Handle Ontologies

ontology interoperability

Updated Jan 16, 2024
R

reese3928 / methylGSA

A Bioconductor package and shiny app for DNA methylation data length bias adjustment in gene set testing

enrichment shiny ontology methylation logistic-regression generalized-linear-models

Updated May 8, 2021
R

vjcitn / ontoProc

bioinformatics genomics ontology

Updated Mar 20, 2024
R

sergeitarasov / PARAMO

PARAMO pipeline

ontology anatomy stochastic-mapping trait-evolution comparative-phylogenetics

Updated Feb 12, 2019
R

ccb-hms / gwasCatSearch

tooling for semantic search of NHGRI GWAS catalog

gwas shiny ontology bioconductor corpustools text2term ontoproc

Updated May 24, 2024
R

FelixErnst / RevigoR

wrapper for revigo analysis

gene r ontology bioconductor

Updated Nov 17, 2020
R

guokai8 / bioAnno

Build Annotation package by using information from KEGG, NCBI, Ensembl

package gene annotations ontology kegg

Updated May 4, 2023
R

reeantencamah / R-Keyword-extraction-from-text-and-PageRank

The purpose of this project is to connect an ontology(from Protégé) to RStudio and retrieve the details of each class of the ontology on which we have analysed and retrived 5 keywords for each class using tf–idf and also calculate the page rank based on a query search using cosine distance.

r rstudio pagerank-algorithm ontology machinelearning keyword-extraction tfidf cosine-distance stemming textmining textpreprocessing

Updated Jun 2, 2020
R

wilsontom / lexmapR

R Interface to LexMapr (via docker)

docker ontology lexicon foodon

Updated Jan 7, 2022
R

ericaenjoy3 / GOplot

Gene ontology enrichment and clustering analysis

gene test ontology exact fisher-s

Updated Sep 8, 2017
R

biomedicalinformaticsgroup / topOnto

topOnto - An R package for generically enabled ontology enrichment analysis

bioinformatics r ontology sea enrichment-analysis

Updated Jun 27, 2017
R

sigven / phenOncoX

Crossmapped phenotype ontologies for the oncology domain

ontology phenotypes cancer-research oncology phenotype-exchange-format phenotype-ontologies phenotype-corpus

Updated May 21, 2024
R

sergeitarasov / ontoFAST

Interactive, semi-automatic annotation of character matrices (character statements) with biological ontologies

annotations ontology phylogenetics characters character-matrices

Updated Aug 4, 2022
R

Improve this page

Add a description, image, and links to the ontology topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the ontology topic, visit your repo's landing page and select "manage topics."